2016年10月21日金曜日

Ant-Tubercular Quinazolines 2016



Identification and optimization of a new series of anti-tubercular quinazolinones





Abstract

A high throughput phenotypic screening against Mycobacterium smegmatis led us to the discovery of a new class of bacteriostatic, highly hydrophobic antitubercular quinazolinones that potently inhibited the in vitro growth of either extracellular or intramacrophagic M. tuberculosis (Mtb), via modulation of an unidentified but yet novel target. Optimization of the initial hit compound culminated in the identification of potent but poorly soluble Mtb growth inhibitors, three of which were progressed to in vivo efficacy studies. Despite nanomolar in vitro potency and attractive PK properties, none of these compounds was convincingly potent in our in vivo mouse tuberculosis models. This lack of efficacy may be linked to the poor drug-likeness of the test molecules and/or to the properties of the target.

 





Graphical abstract

A high throughput phenotypic screening against Mycobacterium smegmatis led us to the discovery of a new class of bacteriostatic, highly hydrophobic antitubercular quinazolinones that potently inhibited the in vitro growth of either extracellular or intramacrophagic M. tuberculosis (Mtb), via modulation of an unidentified but yet novel target. Optimization of the initial hit compound culminated in the identification of potent but poorly soluble Mtb growth inhibitors, three of which were progressed to in vivo efficacy studies. Despite nanomolar in vitro potency and attractive PK properties, none of these compounds was convincingly potent in our in vivo mouse tuberculosis models. This lack of efficacy may be linked to the poor drug-likeness of the test molecules and/or to the properties of the target. 


Keywords

  • Tuberculosis;
  • High throughput screening;
  • Antitubercular drugs;
  • Lead optimization


Corresponding author. Tel.: +33 (0)4 37 37 07 35.



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PA-824 Analogs 2015


Side Chain Analogues of the Antitubercular Drug PA-824:

 

(6S)-2-Nitro-6-{[4-(trifluoromethoxy)benzyl]oxy}-6,7-dihydro-5H-imidazo[2,1-b][1,3]oxazine



† Auckland Cancer Society Research Centre, School of Medical Sciences, The University of Auckland, Private Bag 92019, Auckland 1142, New Zealand
‡ Institute for Tuberculosis Research, College of Pharmacy, University of Illinois at Chicago, 833 South Wood Street, Chicago, Illinois 60612, United States
§ Global Alliance for TB Drug Development, 40 Wall Street, New York, New York 10005, United States
J. Med. Chem., 2015, 58 (7), pp 3036–3059
 
 
DOI: 10.1021/jm501608q
Publication Date (Web): March 17, 2015
Copyright © 2015 American Chemical Society
*Phone: (+649) 923-6145. Fax: (+649) 373-7502. E-mail: am.thompson@auckland.ac.nz.

Abstract

Abstract Image
 
 
 
 
Novel extended side chain nitroimidazooxazine analogues featuring diverse linker groups between two aryl rings were studied as a potential strategy to improve solubility and oral activity against chronic infection by Mycobacterium tuberculosis. Both lipophilic and highly polar functionalities (e.g., carboxamide, alkylamine, piperazine, piperidine, but not sulfonamide) were well tolerated in vitro, and the hydrophilic linkers provided some solubility improvements, particularly in combination with pyridine rings. Most of the 18 compounds further assessed showed high microsomal stabilities, although in the acute infection mouse model, just one stilbene (6-fold) and two pyridine-containing acetylene derivatives (5-fold and >933-fold) gave in vivo efficacies notably superior to the clinical stage compound pretomanid (PA-824). The most efficacious analogue also displayed outstanding in vivo activity in the stringent chronic model (up to 24-fold better than the drug delamanid and 4-fold greater than our previous best phenylpyridine candidate), with favorable pharmacokinetics, including good oral bioavailability in the rat.

Supporting Information


Additional biological assay data, graphs of pharmacokinetic data, experimental procedures and characterisations for compounds, combustion analytical data, and representative NMR spectra. This material is available free of charge via the Internet at http://pubs.acs.org.


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2016年10月11日火曜日

Novo Design to the Discovery of Selective Inhibitors of GlSK-3b 2016


FBDD on the Discovery of Selective Picomolar Inhibitors of GSK-3 Beta


† Department of Bioscience and Biotechnology, Sejong University, Seoul 143-747, Korea
‡ Department of Chemistry, Korea Advanced Institute of Science and Technology (KAIST), Yuseong-gu, E6-4, Daejeon 305-701, Korea
§ Center for Catalytic Hydrocarbon Functionalizations, Institute of Basic Science (IBS), Daejeon 305-701, Korea
J. Med. Chem., Article ASAP
DOI: 10.1021/acs.jmedchem.6b00944
 
 
Publication Date (Web): September 27, 2016
Copyright © 2016 American Chemical Society
 

Abstract

Abstract Image
 
 
 
A systematic fragment-based de novo design procedure was developed and applied to discover new potent and selective inhibitors of glycogen synthase kinase-3 beta (GSK3β). Candidate inhibitors were generated to simultaneously maximize the biochemical potency and the specificity for GSK3β through three design steps: identification of the optimal molecular fragments for the three sub-binding regions, design of proper linking moieties to connect the fragmental building blocks, and final scoring of the generated molecules. By virtue of modifying the ligand hydration free energy term in the scoring function using hybrid scaled particle theory and the extended solvent-contact model, we identified several GSK3β inhibitors with biochemical potencies ranging from low nanomolar to picomolar levels. Among them, the two most potent inhibitors (12 and 27) are anticipated to serve as promising starting points of drug discovery for various diseases caused by GSK3β because of the high specificity for the inhibition of GSK3β.

Supporting Information


The Supporting Information is available free of charge on the ACS Publications website at DOI: 10.1021/acs.jmedchem.6b00944.
  • Spectral data for all listed compounds (PDF)
  • Molecular formula strings(CSV)

Discovery of Novel GSK-3β Inhibitors 2016



Discovery of Novel GSK-3β Inhibitors with Excellent Brain Permeability


Department of Basic Pharmaceutical Sciences, College of Pharmacy, University of Louisiana at Monroe, Monroe, Louisiana 71201, United States
J. Med. Chem., 2010, 53 (24), pp 8534–8545
DOI: 10.1021/jm100941j
Publication Date (Web): November 17, 2010
Copyright © 2010 American Chemical Society
*To whom correspondence should be addressed. Phone: +1 318 342 1725. Fax: +1 318 342 1737. E-mail: elsayed@ulm.edu.

Abstract

Abstract Image
Dysregulation of glycogen synthase kinase (GSK-3β) is implicated in the pathophysiology of many diseases, including type-2 diabetes, stroke, Alzheimer’s, and others. A multistage virtual screening strategy designed so as to overcome known caveats arising from the considerable flexibility of GSK-3β yielded, from among compounds in our in-house database and two commercial databases, new GSK-3β inhibitors with novel scaffold structures. The two most potent and selective validated hits, a 2-anilino-5-phenyl-1,3,4-oxadiazole (24) and a phenylmethylene hydantoin (28), both exhibited nanomolar affinity and selectivity over CDK2 and were potent enough for direct in vivo validation. Both were able to cause significant increases in liver glycogen accumulation in dose-dependent fashion. One also exhibited excellent blood−brain barrier permeability, the other adequate for a lead compound. Analogues of the oxadiazole 24 were synthesized to experimentally corroborate or rule out ligand-bound structures arising from docking studies. SAR results supported one docking study among a number of alternatives.

Supporting Information


Analytical data of compounds 1, 4, 6, 8, 13, 16, 17, 19, 21, 23, 24, 27, 28, 30, and GSK-3β inhibitory activity graphs of 24 and 28. This material is available free of charge via the Internet at http://pubs.acs.org.


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Other ACS content by these authors:





Caイオンシグナルから タウ神経の変性へ 2016


4.  まとめ

患者さん由来iPS細胞を用いることにより、
異常に折りたたまれたタウタンパク質が蓄積している様子や
細胞死といった病態を再現することができ、

また、神経活動と密接に係わるカルシウムイオンの調節異常が
FTLD-Tauの神経変性に関与するというメカニズムを明らかにしました。


説明図・3枚目
図3. 本研究成果のまとめ


本研究の手法は他の神経変性疾患の研究へも応用が可能と考えられ、今後の研究の進展に貢献するものと期待されます。

5.論文名と著者

論文名
“Calcium dysregulation contributes to neurodegeneration in FTLD patient iPSC-derived neurons”
ジャーナル名
Scientific Reports
著者
Keiko Imamura1, Naruhiko Sahara2, Nicholas M. Kanaan3, Kayoko Tsukita1, Takayuki Kondo1, Yumiko Kutoku4, Yutaka Ohsawa4, Yoshihide Sunada4, Koichi Kawakami5,6, Akitsu Hotta1, Satoshi Yawata7, Dai Watanabe7, Masato Hasegawa8, John Q. Trojanowski9, Virginia M. Y. Lee9, Tetsuya Suhara2, Makoto Higuchi2, Haruhisa Inoue1
著者の所属機関
  1. 京都大学iPS細胞研究所(CiRA)
  2. 国立研究開発法人量子科学技術研究開発機構放射線医学総合研究所
  3. ミシガン州立大学医学部
  4. 川崎医科大学
  5. 国立遺伝学研究所
  6. 総合研究大学院大学
  7. 京都大学医学研究科
  8. 東京都医学総合研究所
  9. ペンシルベニア大学医学大学院

2016年10月9日日曜日

Direct Convertion of the Carboxylic Acids into Corresponding Ketones 2011 & 2016

Five Equivalent of Cyano Cupurates (Posner Reagents) Can Convert
the Carboxylic Acids directly into the Ketones;

Letter



Cyanocuprates Convert Carboxylic Acids Directly into Ketones

Department of Chemistry,
School of Arts and Sciences, The Johns Hopkins University,
 
3400 North Charles Street, Baltimore, Maryland 21218-2685, United States
 
Org. Lett., 2011, 13 (19), pp 5358–5361
DOI: 10.1021/ol202237j
Publication Date (Web): September 6, 2011
Copyright © 2011 American Chemical Society

Abstract

Abstract Image
 
 
Carboxylic acids were converted directly in 56–99% yields into methyl, n-butyl, and isopropyl ketones using excess cyanocuprates R2CuLi·LiCN. A substrate with a stereocenter α to the carboxylic acid was converted into ketones with very little loss of enantiomeric purity. A variety of functional groups were tolerated including aryl bromides. This direct transformation of a carboxylic acid into ketone with minimal tertiary alcohol formation is proposed to involve a relatively stable copper ketal tetrahedral intermediate.

Supporting Information


1H and 13C NMR spectra for all new compounds. This material is available free of charge via the Internet at http://pubs.acs.org.
Citation data is made available by participants in CrossRef's Cited-by Linking service. For a more comprehensive list of citations to this article, users are encouraged to perform a search in SciFinder.